EnhancerDB
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  3. rs34897392[chr12:65064324]
Enhancers that have rs34897392[chr12:65064324]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 65039765 65087550 enh2405
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs34897392[chr12:65064324]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 65063745 65064341 TCF7L2 ENCODE Uniform TFBS no Pancreas (Panc1) 21552893
chr12 65063745 65064341 TCF7L2 ENCODE Uniform TFBS no Pancreas (Panc1) 108041903
chr12 65064164 65064509 ZNF274 GTRD no Liver (HepG2) 21552899
chr12 65064164 65064509 ZNF274 GTRD no Liver (HepG2) 108041911
chr12 65064304 65064325 IRF1 JASPAR yes 121424138
chr12 65064308 65064329 IRF1 JASPAR yes 121424140
chr12 65064310 65064331 IRF1 JASPAR yes 121424141
chr12 65064312 65064333 IRF1 JASPAR yes 121424142
chr12 65064314 65064329 PRDM1 JASPAR yes 121424143
chr12 65064314 65064335 IRF1 JASPAR yes 121424144
chr12 65064316 65064337 IRF1 JASPAR yes 121424145
chr12 65064318 65064339 IRF1 JASPAR yes 121424146
chr12 65064319 65064334 FOXP1 JASPAR yes 121424147
chr12 65064319 65064340 IRF1 JASPAR yes 121424148
chr12 65064320 65064335 STAT2 JASPAR yes 121424149
chr12 65064320 65064341 IRF1 JASPAR yes 121424150
chr12 65064321 65064336 FOXP1 JASPAR yes 121424151
chr12 65064321 65064342 IRF1 JASPAR yes 121424152
chr12 65064323 65064338 FOXP1 JASPAR yes 121424153
chr12 65064324 65064339 FOXP1 JASPAR yes 121424154
Genes associated with rs34897392[chr12:65064324], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More