EnhancerDB
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  3. rs34977902[chr1:229361889]
Enhancers that have rs34977902[chr1:229361889]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 229351665 229369695 enh12764
Liver Colon (HCT116) Pancreas Uterus Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Liver (HepG2) Prostate (RWPE1) Lung Heart
Transcript factors that have rs34977902[chr1:229361889]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 229361878 229361893 FOXP1 JASPAR yes 35976985
chr1 229361878 229361899 IRF1 JASPAR yes 35976986
chr1 229361879 229361894 FOXP1 JASPAR yes 35976987
chr1 229361881 229361896 FOXP1 JASPAR yes 35976988
chr1 229361882 229361903 IRF1 JASPAR yes 35976989
chr1 229361883 229361898 FOXP1 JASPAR yes 35976990
chr1 229361883 229361904 IRF1 JASPAR yes 35976991
chr1 229361884 229361905 IRF1 JASPAR yes 35976992
chr1 229361888 229361903 FOXP1 JASPAR yes 35976993
chr1 229361888 229361909 IRF1 JASPAR yes 35976994
chr1 229361889 229361910 IRF1 JASPAR yes 35976995
Genes associated with rs34977902[chr1:229361889], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More