EnhancerDB
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  3. rs34989207[chr1:19788790]
Enhancers that have rs34989207[chr1:19788790]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 19747725 19800935 enh99
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Breast Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs34989207[chr1:19788790]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 19788777 19788792 MEF2C JASPAR yes 27193769
chr1 19788778 19788793 MEF2A JASPAR yes 27193770
chr1 19788779 19788791 MEF2A JASPAR yes 27193771
chr1 19788779 19788791 MEF2B JASPAR yes 27193772
chr1 19788779 19788791 MEF2D JASPAR yes 27193773
chr1 19788785 19788800 MEF2C JASPAR yes 27193774
chr1 19788786 19788801 FOXP1 JASPAR yes 27193775
chr1 19788787 19788802 FOXP1 JASPAR yes 27193776
chr1 19788788 19788803 FOXP1 JASPAR yes 27193777
Genes associated with rs34989207[chr1:19788790], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More