EnhancerDB
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  3. rs35097598[chr1:19790514]
Enhancers that have rs35097598[chr1:19790514]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 19747725 19800935 enh99
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Breast Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs35097598[chr1:19790514]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 19790501 19790516 MEF2C JASPAR yes 27194005
chr1 19790502 19790517 MEF2A JASPAR yes 27194006
chr1 19790503 19790515 MEF2A JASPAR yes 27194007
chr1 19790503 19790515 MEF2B JASPAR yes 27194008
chr1 19790503 19790515 MEF2D JASPAR yes 27194009
chr1 19790509 19790524 MEF2C JASPAR yes 27194010
chr1 19790509 19790530 IRF1 JASPAR yes 27194011
chr1 19790510 19790525 FOXP1 JASPAR yes 27194012
chr1 19790510 19790531 IRF1 JASPAR yes 27194013
chr1 19790511 19790526 FOXP1 JASPAR yes 27194014
chr1 19790512 19790527 FOXP1 JASPAR yes 27194015
chr1 19790513 19790528 FOXP1 JASPAR yes 27194016
chr1 19790514 19790529 FOXP1 JASPAR yes 27194017
Genes associated with rs35097598[chr1:19790514], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More