EnhancerDB
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  3. rs35146272[chr1:12610399]
Enhancers that have rs35146272[chr1:12610399]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 12597605 12619763 enh11515
Bone Marrow (K562) Astrocyte Colon (HCT116) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Thyroid Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Lung Heart
Transcript factors that have rs35146272[chr1:12610399]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 12606847 12611860 ZBTB33 GTRD no Lung (A549) 107802126
chr1 12610386 12610401 HNF1A JASPAR yes 26832728
chr1 12610387 12610400 HNF1B JASPAR yes 26832729
chr1 12610387 12610408 IRF1 JASPAR yes 26832730
chr1 12610393 12610414 IRF1 JASPAR yes 26832731
chr1 12610394 12610415 IRF1 JASPAR yes 26832732
chr1 12610398 12610413 FOXP1 JASPAR yes 26832733
chr1 12610399 12610414 FOXP1 JASPAR yes 26832734
Genes associated with rs35146272[chr1:12610399], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More