EnhancerDB
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  3. rs35223928[chr17:42188298]
Enhancers that have rs35223928[chr17:42188298]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 42170662 42193575 enh17179
Bone Marrow (K562) Astrocyte Colon (HCT116) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs35223928[chr17:42188298]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 42188288 42188300 ZBTB7B JASPAR yes 54388553
chr17 42188288 42188300 ZBTB7C JASPAR yes 54388554
chr17 42188289 42188301 ZBTB7A JASPAR yes 54388555
chr17 42188297 42188316 REST JASPAR yes 54388556
chr17 42188298 42188302 LFA1 TRANSFAC yes 54388557
Genes associated with rs35223928[chr17:42188298], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More