EnhancerDB
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  3. rs35340308[chr1:171395420]
Enhancers that have rs35340308[chr1:171395420]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 171385965 171412775 enh12367
Brain (SK-N-MC) Astrocyte Colon (HCT116) Embryonic Stem Cell Line (H1-hESC) Uterus Blood (T-cell) Stomach Epithelial (MCF-7) Skin (Keratinocyte) Lung (A549) Peripheral Blood (MM.1S) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Placenta Lung (PC-9) Muscle (Myoblast) Breast Spleen Muscle (Myotube) Prostate (RWPE1)
Transcript factors that have rs35340308[chr1:171395420]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 171395405 171395425 TP53 JASPAR yes 33079291
chr1 171395414 171395424 HOXA13 JASPAR yes 33079292
chr1 171395414 171395424 HOXB13 JASPAR yes 33079293
chr1 171395414 171395424 HOXD13 JASPAR yes 33079294
chr1 171395416 171395420 TEAD2 TRANSFAC yes 33079295
chr1 171395416 171395421 TBP TRANSFAC yes 33079296
chr1 171395416 171395422 TFIID TRANSFAC yes 33079297
Genes associated with rs35340308[chr1:171395420], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More