EnhancerDB
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  3. rs35402075[chr1:154392674]
Enhancers that have rs35402075[chr1:154392674]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 154376585 154406743 enh12276
Astrocyte Colon (HCT116) Adrenal Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Lung (A549) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
chr1 154392646 154393050 vista3374
VISTA
Transcript factors that have rs35402075[chr1:154392674]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 154392181 154392831 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21340414
chr1 154392181 154392831 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107832576
chr1 154392181 154392831 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107832577
chr1 154392236 154392746 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21340417
chr1 154392236 154392746 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107832580
chr1 154392517 154393167 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21340418
chr1 154392517 154393167 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107832581
chr1 154392661 154392677 POU4F3 JASPAR yes 32290505
chr1 154392661 154392677 POU4F3 JASPAR yes 118372689
chr1 154392663 154392677 POU4F1 JASPAR yes 32290506
chr1 154392663 154392677 POU4F1 JASPAR yes 118372690
chr1 154392663 154392678 HNF1A JASPAR yes 32290507
chr1 154392663 154392678 HNF1A JASPAR yes 118372691
chr1 154392663 154393059 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21340419
chr1 154392663 154393059 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107832582
chr1 154392664 154392676 HNF1B JASPAR yes 32290508
chr1 154392664 154392676 HNF1B JASPAR yes 118372692
chr1 154392670 154392685 HNF1A JASPAR yes 32290509
chr1 154392670 154392685 HNF1A JASPAR yes 118372693
chr1 154392671 154392683 HNF1B JASPAR yes 32290510
chr1 154392671 154392683 HNF1B JASPAR yes 118372694
chr1 154392672 154392686 POU4F1 JASPAR yes 32290511
chr1 154392672 154392686 POU4F1 JASPAR yes 118372695
chr1 154392672 154392688 POU4F2 JASPAR yes 32290512
chr1 154392672 154392688 POU4F3 JASPAR yes 32290513
chr1 154392672 154392688 POU4F2 JASPAR yes 118372696
chr1 154392672 154392688 POU4F3 JASPAR yes 118372697
chr1 154392674 154392685 CDX2 JASPAR yes 32290514
chr1 154392674 154392685 CDX2 JASPAR yes 118372698
chr1 154392674 154393044 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21340420
chr1 154392674 154393044 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107832583
Genes associated with rs35402075[chr1:154392674], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More