EnhancerDB
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  3. rs35547176[chr1:19784989]
Enhancers that have rs35547176[chr1:19784989]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 19747725 19800935 enh99
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Breast Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs35547176[chr1:19784989]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 19784986 19784995 SNAI2 JASPAR yes 27193178
chr1 19784986 19784996 ID4 JASPAR yes 27193179
chr1 19784986 19784996 TCF3 JASPAR yes 27193180
chr1 19784986 19784996 TCF4 JASPAR yes 27193181
Genes associated with rs35547176[chr1:19784989], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More