EnhancerDB
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  3. rs35552828[chr12:106505680]
Enhancers that have rs35552828[chr12:106505680]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 106497985 106511535 enh29958
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Liver Lung (PC-9) Bone (Osteoblast) Lung Stomach Peripheral Blood (MM.1S) Uterus Muscle (Myoblast) Breast Muscle (Myotube) Neural Stem Cells (H9) Heart
Transcript factors that have rs35552828[chr12:106505680]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 106505673 106505688 FOXP1 JASPAR yes 123490410
chr12 106505678 106505693 FOXP1 JASPAR yes 123490411
chr12 106505678 106505699 IRF1 JASPAR yes 123490412
chr12 106505679 106505685 TBP TRANSFAC yes 123490413
chr12 106505679 106505694 FOXP1 JASPAR yes 123490414
chr12 106505679 106505700 IRF1 JASPAR yes 123490415
chr12 106505680 106505695 FOXP1 JASPAR yes 123490416
chr12 106505680 106505701 IRF1 JASPAR yes 123490417
Genes associated with rs35552828[chr12:106505680], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More