EnhancerDB
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  3. rs35562520[chr2:102336647]
Enhancers that have rs35562520[chr2:102336647]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 102318065 102395755 enh5746
Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Spleen Muscle (Myotube) Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs35562520[chr2:102336647]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 102336641 102336662 IRF1 JASPAR yes 75830644
chr2 102336642 102336657 FOXP1 JASPAR yes 75830645
chr2 102336644 102336659 FOXP1 JASPAR yes 75830646
chr2 102336646 102336661 FOXP1 JASPAR yes 75830647
chr2 102336647 102336662 FOXP1 JASPAR yes 75830648
Genes associated with rs35562520[chr2:102336647], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More