EnhancerDB
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Enhancers that have rs35643897[chr1:167772520]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 167759045 167777775 enh27199
Liver Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs35643897[chr1:167772520]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 167772338 167773215 KAP1 UCSC Txn Factor no Conserved 107844261
chr1 167772343 167772873 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21347314
chr1 167772343 167772873 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107844262
chr1 167772371 167772887 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21347315
chr1 167772371 167772887 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107844263
chr1 167772401 167772977 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 107844264
chr1 167772408 167772818 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107844265
chr1 167772418 167772818 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107844266
chr1 167772424 167772944 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 107844267
chr1 167772437 167772821 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 107844268
chr1 167772456 167772872 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107844269
chr1 167772476 167773056 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 107844270
chr1 167772480 167773000 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107844271
chr1 167772484 167773000 CTCF UCSC Txn Factor no Conserved 107844272
chr1 167772487 167772943 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21347316
chr1 167772487 167772943 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107844273
chr1 167772489 167773025 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 107844274
chr1 167772493 167773013 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107844275
chr1 167772498 167772822 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 107844276
chr1 167772502 167772878 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 107844277
chr1 167772506 167772970 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21347317
chr1 167772506 167772970 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107844278
chr1 167772509 167772945 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107844279
chr1 167772513 167772897 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21347318
chr1 167772513 167772897 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107844280
chr1 167772515 167772915 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 107844281
chr1 167772516 167772892 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107844282
chr1 167772519 167772540 IRF1 JASPAR yes 32894958
chr1 167772519 167772875 TAF1 ENCODE Uniform TFBS no Brain (SK-N-SH) 21347319
chr1 167772519 167772875 TAF1 ENCODE Uniform TFBS no Brain (SK-N-SH) 107844283
chr1 167772520 167773010 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 107844284
Genes associated with rs35643897[chr1:167772520], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More