EnhancerDB
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  3. rs35717427[chr1:154391882]
Enhancers that have rs35717427[chr1:154391882]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 154376585 154406743 enh12276
Astrocyte Colon (HCT116) Adrenal Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Lung (A549) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
chr1 154391539 154392211 vista3373
VISTA
Transcript factors that have rs35717427[chr1:154391882]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 154390691 154392004 P63 GTRD no Skin (Keratinocyte) 21340388
chr1 154390691 154392004 P63 GTRD no Skin (Keratinocyte) 107832545
chr1 154390706 154392011 P63 GTRD no Skin (Keratinocyte) 21340389
chr1 154390706 154392011 P63 GTRD no Skin (Keratinocyte) 107832546
chr1 154390790 154392109 P63 GTRD no Skin (Keratinocyte) 21340390
chr1 154390790 154392109 P63 GTRD no Skin (Keratinocyte) 107832547
chr1 154390907 154391950 P63 GTRD no Skin (Keratinocyte) 21340391
chr1 154390907 154391950 P63 GTRD no Skin (Keratinocyte) 107832548
chr1 154391825 154392065 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21340393
chr1 154391825 154392065 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 107832552
chr1 154391844 154392120 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21340394
chr1 154391844 154392120 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 107832553
chr1 154391868 154391887 RFX2 JASPAR yes 32290414
chr1 154391868 154391887 RFX2 JASPAR yes 118372653
chr1 154391872 154391882 NFATC3 JASPAR yes 32290416
chr1 154391872 154391882 NFATC3 JASPAR yes 118372655
chr1 154391877 154391887 MAX JASPAR yes 32290417
chr1 154391877 154391887 MAX JASPAR yes 118372656
Genes associated with rs35717427[chr1:154391882], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More