EnhancerDB
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  3. rs35781962[chr1:39627567]
Enhancers that have rs35781962[chr1:39627567]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 39588469 39628695 enh11759
Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Adrenal Pancreas Uterus Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs35781962[chr1:39627567]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 39627557 39627568 PROP1 JASPAR yes 28260697
chr1 39627564 39627579 FOXP1 JASPAR yes 28260698
chr1 39627564 39627585 IRF1 JASPAR yes 28260699
chr1 39627566 39627572 TBP TRANSFAC yes 28260700
Genes associated with rs35781962[chr1:39627567], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More