EnhancerDB
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  3. rs35949886[chr6:30743678]
Enhancers that have rs35949886[chr6:30743678]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 30740965 30818275 enh23149
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Adrenal Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Lung (A549) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs35949886[chr6:30743678]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 30743672 30743693 IRF1 JASPAR yes 101047729
chr6 30743673 30743694 IRF1 JASPAR yes 101047730
chr6 30743677 30743692 FOXP1 JASPAR yes 101047731
chr6 30743678 30743693 FOXP1 JASPAR yes 101047732
Genes associated with rs35949886[chr6:30743678], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More