EnhancerDB
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  3. rs36001517[chr17:41490571]
Enhancers that have rs36001517[chr17:41490571]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 41479046 41498765 enh17167
Brain (SK-N-MC) Astrocyte Uterus Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Breast Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs36001517[chr17:41490571]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 41490563 41490582 REST JASPAR yes 54343950
chr17 41490565 41490574 HIC2 JASPAR yes 54343951
chr17 41490567 41490577 SP1 JASPAR yes 54343952
chr17 41490568 41490572 LFA1 TRANSFAC yes 54343953
Genes associated with rs36001517[chr17:41490571], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More