EnhancerDB
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  3. rs36065680[chr12:120673133]
Enhancers that have rs36065680[chr12:120673133]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 120660005 120685163 enh2636
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Bone (Osteoblast) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Breast Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs36065680[chr12:120673133]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 120672565 120673289 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21578548
chr12 120672565 120673289 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108063356
chr12 120672582 120673238 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 21578557
chr12 120672582 120673238 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 108063366
chr12 120672653 120673149 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21578571
chr12 120672653 120673149 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108063384
chr12 120672665 120673141 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21578573
chr12 120672665 120673141 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108063386
chr12 120673128 120673143 ZIC3 JASPAR yes 124157147
chr12 120673128 120673143 ZIC4 JASPAR yes 124157148
chr12 120673129 120673143 ZIC1 JASPAR yes 124157149
Genes associated with rs36065680[chr12:120673133], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More
chr12 121124672 121139667 + MLEC ENSG00000110917.3 121124672 451539 Breast 0.338908 12614