EnhancerDB
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  3. rs368406416[chr1:203254734]
Enhancers that have rs368406416[chr1:203254734]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 203242209 203262675 enh881
Bone Marrow (K562) Colon (HCT116) Adrenal Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Large Intestine Esophagus Blood (GM12878) Placenta Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs368406416[chr1:203254734]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 203254482 203255192 GATA3 GTRD no Thymus 21367802
chr1 203254527 203254839 ZNF274 GTRD no Liver (HepG2) 21367803
chr1 203254715 203254736 IRF1 JASPAR yes 34613647
chr1 203254716 203254737 IRF1 JASPAR yes 34613649
chr1 203254717 203254738 IRF1 JASPAR yes 34613650
chr1 203254721 203254736 FOXP1 JASPAR yes 34613651
chr1 203254721 203254742 IRF1 JASPAR yes 34613652
chr1 203254722 203254743 IRF1 JASPAR yes 34613653
chr1 203254723 203254738 FOXP1 JASPAR yes 34613654
chr1 203254723 203254738 LEF1 JASPAR yes 34613655
chr1 203254723 203254744 IRF1 JASPAR yes 34613656
chr1 203254724 203254745 IRF1 JASPAR yes 34613657
chr1 203254728 203254743 FOXP1 JASPAR yes 34613658
chr1 203254728 203254749 IRF1 JASPAR yes 34613659
chr1 203254729 203254744 FOXP1 JASPAR yes 34613660
chr1 203254732 203254747 STAT2 JASPAR yes 34613661
chr1 203254732 203254753 IRF1 JASPAR yes 34613662
chr1 203254733 203254748 FOXP1 JASPAR yes 34613663
chr1 203254734 203254755 IRF1 JASPAR yes 34613664
Genes associated with rs368406416[chr1:203254734], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More