EnhancerDB
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  3. rs368556628[chr6:17704990]
Enhancers that have rs368556628[chr6:17704990]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 17698684 17705655 enh8981
Bone Marrow (K562) Skin (Keratinocyte) Liver (HepG2) Cervix (HeLa-S3) Blood (T-cell) Astrocyte Blood (GM12878) Muscle (A673) Placenta Colon (HCT116) Uterus Peripheral Blood (MM.1S) Blood (Karpas-422) Neural Stem Cells (H9) Thymus Stomach
Transcript factors that have rs368556628[chr6:17704990]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 17704984 17705005 IRF1 JASPAR yes 100395439
chr6 17704986 17705001 PRDM1 JASPAR yes 100395440
chr6 17704986 17705001 STAT2 JASPAR yes 100395441
chr6 17704986 17705007 IRF1 JASPAR yes 100395442
chr6 17704989 17705004 FOXP1 JASPAR yes 100395443
chr6 17704990 17705005 FOXP1 JASPAR yes 100395444
Genes associated with rs368556628[chr6:17704990], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More