EnhancerDB
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  3. rs368588325[chr17:55987338]
Enhancers that have rs368588325[chr17:55987338]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 55982093 56031480 enh4496
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs368588325[chr17:55987338]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 55987327 55987348 IRF1 JASPAR yes 54997854
chr17 55987332 55987352 RREB1 JASPAR yes 54997855
chr17 55987333 55987354 IRF1 JASPAR yes 54997856
chr17 55987337 55987349 IRF1 JASPAR yes 54997857
chr17 55987337 55987357 RREB1 JASPAR yes 54997858
chr17 55987338 55987359 IRF1 JASPAR yes 54997859
Genes associated with rs368588325[chr17:55987338], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More