EnhancerDB
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  3. rs368978053[chr17:25678006]
Enhancers that have rs368978053[chr17:25678006]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 25656275 25685575 enh4305
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs368978053[chr17:25678006]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 25677996 25678017 IRF1 JASPAR yes 53623159
chr17 25677998 25678013 IRF9 JASPAR yes 53623160
chr17 25678000 25678014 STAT1 JASPAR yes 53623161
chr17 25678000 25678015 PRDM1 JASPAR yes 53623162
chr17 25678000 25678015 STAT2 JASPAR yes 53623163
chr17 25678002 25678023 IRF1 JASPAR yes 53623164
chr17 25678005 25678019 IRF7 JASPAR yes 53623165
Genes associated with rs368978053[chr17:25678006], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More