EnhancerDB
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  3. rs369943525[chr1:39599879]
Enhancers that have rs369943525[chr1:39599879]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 39588469 39628695 enh11759
Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Adrenal Pancreas Uterus Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs369943525[chr1:39599879]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 39599864 39599883 PAX5 JASPAR yes 28256086
chr1 39599878 39599893 FOXP1 JASPAR yes 28256088
chr1 39599879 39599894 FOXP1 JASPAR yes 28256089
Genes associated with rs369943525[chr1:39599879], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More