EnhancerDB
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  3. rs370879716[chr1:154391753]
Enhancers that have rs370879716[chr1:154391753]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 154376585 154406743 enh12276
Astrocyte Colon (HCT116) Adrenal Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Lung (A549) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
chr1 154391539 154392211 vista3373
VISTA
Transcript factors that have rs370879716[chr1:154391753]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 154390691 154392004 P63 GTRD no Skin (Keratinocyte) 21340388
chr1 154390691 154392004 P63 GTRD no Skin (Keratinocyte) 107832545
chr1 154390706 154392011 P63 GTRD no Skin (Keratinocyte) 21340389
chr1 154390706 154392011 P63 GTRD no Skin (Keratinocyte) 107832546
chr1 154390790 154392109 P63 GTRD no Skin (Keratinocyte) 21340390
chr1 154390790 154392109 P63 GTRD no Skin (Keratinocyte) 107832547
chr1 154390907 154391950 P63 GTRD no Skin (Keratinocyte) 21340391
chr1 154390907 154391950 P63 GTRD no Skin (Keratinocyte) 107832548
chr1 154391399 154391803 ZNF274 GTRD no Bone Marrow (K562) 107832550
chr1 154391740 154391755 HNF1A JASPAR yes 32290398
chr1 154391740 154391755 HNF1A JASPAR yes 118372637
chr1 154391741 154391754 HNF1B JASPAR yes 32290399
chr1 154391741 154391754 HNF1B JASPAR yes 118372638
chr1 154391744 154391756 PBX1 JASPAR yes 32290400
chr1 154391744 154391756 PBX1 JASPAR yes 118372639
chr1 154391748 154391757 SRY JASPAR yes 32290401
chr1 154391748 154391757 SRY JASPAR yes 118372640
chr1 154391751 154391764 POU3F3 JASPAR yes 32290402
chr1 154391751 154391764 POU3F3 JASPAR yes 118372641
chr1 154391752 154391764 POU3F1 JASPAR yes 32290403
chr1 154391752 154391764 POU3F2 JASPAR yes 32290404
chr1 154391752 154391764 POU3F1 JASPAR yes 118372642
chr1 154391752 154391764 POU3F2 JASPAR yes 118372643
Genes associated with rs370879716[chr1:154391753], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More