EnhancerDB
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  3. rs371396391[chr17:78622650]
Enhancers that have rs371396391[chr17:78622650]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 78617185 78655235 enh4633
Bone Marrow (K562) Astrocyte Colon (HCT116) Blood (Karpas-422) Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Neural Stem Cells (H9) Thymus Prostate (PC-3) Large Intestine Esophagus Placenta Muscle (Myoblast) Breast Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Heart
Transcript factors that have rs371396391[chr17:78622650]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 78622640 78622656 GLIS1 JASPAR yes 56262471
chr17 78622646 78622651 SP1 TRANSFAC yes 56262472
chr17 78622647 78622652 SP1 TRANSFAC yes 56262473
chr17 78622650 78622660 REL JASPAR yes 56262474
chr17 78622650 78622661 NFKB1 JASPAR yes 56262475
Genes associated with rs371396391[chr17:78622650], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More