EnhancerDB
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  3. rs372454208[chr1:224019839]
Enhancers that have rs372454208[chr1:224019839]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 224017164 224031755 enh12713
Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Stomach Skin (Keratinocyte) Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Prostate (RWPE1) Muscle (A673) Heart
chr1 224019430 224020596 vista5280
VISTA
Transcript factors that have rs372454208[chr1:224019839]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 224019496 224019856 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107873241
chr1 224019500 224019840 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21384027
chr1 224019500 224019840 JUN UCSC Txn Factor no Conserved 107873242
chr1 224019500 224019840 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107873243
chr1 224019506 224020102 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107873244
chr1 224019571 224019967 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107873246
chr1 224019571 224020027 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107873247
chr1 224019574 224019894 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21384028
chr1 224019574 224019894 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107873248
chr1 224019578 224020098 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107873249
chr1 224019603 224019846 FOS UCSC Txn Factor no Conserved 107873250
chr1 224019838 224020208 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107873252
chr1 224019839 224019853 TCF7L2 JASPAR yes 35677856
chr1 224019839 224019853 TCF7L2 JASPAR yes 118467345
chr1 224019839 224019854 LEF1 JASPAR yes 35677857
chr1 224019839 224019854 LEF1 JASPAR yes 118467346
Genes associated with rs372454208[chr1:224019839], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More