EnhancerDB
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  3. rs372634728[chr1:212779236]
Enhancers that have rs372634728[chr1:212779236]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 212765205 212784697 enh12647
Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Stomach Epithelial (MCF-7) Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1)
Transcript factors that have rs372634728[chr1:212779236]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 212778301 212781617 EZH2 UCSC Txn Factor no Conserved 107869174
chr1 212779235 212779245 GSC2 JASPAR yes 35140891
chr1 212779235 212779245 GSC JASPAR yes 35140892
chr1 212779236 212779244 OTX1 JASPAR yes 35140893
chr1 212779236 212779244 OTX2 JASPAR yes 35140894
chr1 212779236 212779245 PITX3 JASPAR yes 35140895
Genes associated with rs372634728[chr1:212779236], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More