EnhancerDB
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  3. rs372798853[chr1:12609604]
Enhancers that have rs372798853[chr1:12609604]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 12597605 12619763 enh11515
Bone Marrow (K562) Astrocyte Colon (HCT116) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Thyroid Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Lung Heart
Transcript factors that have rs372798853[chr1:12609604]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 12606847 12611860 ZBTB33 GTRD no Lung (A549) 107802126
chr1 12609591 12609606 NR2C2 JASPAR yes 26832585
chr1 12609592 12609613 ZNF263 JASPAR yes 26832586
chr1 12609598 12609613 HNF4G JASPAR yes 26832587
chr1 12609599 12609614 HNF4A JASPAR yes 26832588
chr1 12609601 12609605 LFA1 TRANSFAC yes 26832589
Genes associated with rs372798853[chr1:12609604], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More