EnhancerDB
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  3. rs3729552[chr1:226872709]
Enhancers that have rs3729552[chr1:226872709]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 226838901 226907579 enh973
Astrocyte Colon (HCT116) Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs3729552[chr1:226872709]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 226869651 226872828 ZNF274 GTRD no Bone Marrow (K562) 107875965
chr1 226869651 226872828 ZNF274 GTRD no Bone Marrow (K562) 107875966
chr1 226869673 226873033 ZNF274 GTRD no Bone Marrow (K562) 107875967
chr1 226869673 226873033 ZNF274 GTRD no Bone Marrow (K562) 107875968
chr1 226871537 226872715 ZNF274 GTRD no Bone Marrow (K562) 107876168
chr1 226872172 226873035 ZNF274 GTRD no Bone Marrow (K562) 107876171
chr1 226872353 226872995 ZNF274 GTRD no Bone Marrow (K562) 107876172
chr1 226872367 226872737 ZNF274 GTRD no Bone Marrow (K562) 107876173
chr1 226872434 226872796 ZNF274 GTRD no Bone Marrow (K562) 107876174
chr1 226872705 226872709 ESR1 TRANSFAC yes 35832685
Genes associated with rs3729552[chr1:226872709], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More