EnhancerDB
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  3. rs373145920[chr17:43249935]
Enhancers that have rs373145920[chr17:43249935]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 43246305 43256255 enh4426
Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Lung Muscle (A673)
Transcript factors that have rs373145920[chr17:43249935]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 43247783 43250788 POLR2A UCSC Txn Factor no Conserved 108263878
chr17 43249533 43250033 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108263879
chr17 43249809 43250245 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108263880
chr17 43249814 43250214 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 108263881
chr17 43249843 43250139 POL24H8 ENCODE Uniform TFBS no Brain (SK-N-MC) 21763204
chr17 43249843 43250139 POL24H8 ENCODE Uniform TFBS no Brain (SK-N-MC) 108263882
chr17 43249862 43250222 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21763205
chr17 43249862 43250222 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108263883
chr17 43249882 43250542 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108263884
chr17 43249882 43250552 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108263885
chr17 43249903 43250193 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 108263886
chr17 43249908 43250192 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21763206
chr17 43249908 43250192 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108263887
chr17 43249910 43250350 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 108263888
chr17 43249911 43250161 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108263889
chr17 43249929 43250179 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108263890
chr17 43249932 43249946 E2F7 JASPAR yes 54432880
chr17 43249933 43249945 E2F8 JASPAR yes 54432881
chr17 43249935 43249950 NR2C2 JASPAR yes 54432882
Genes associated with rs373145920[chr17:43249935], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More