EnhancerDB
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  3. rs3732643[chr3:58053308]
Enhancers that have rs3732643[chr3:58053308]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr3 58016005 58062055 enh20647
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs3732643[chr3:58053308]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr3 58053296 58053316 RREB1 JASPAR yes 2672084
chr3 58053300 58053320 RREB1 JASPAR yes 2672085
chr3 58053302 58053317 FOXA1 JASPAR yes 2672086
chr3 58053303 58053309 TCF4 TRANSFAC yes 2672087
chr3 58053303 58053315 FOXI1 JASPAR yes 2672088
chr3 58053303 58053318 FOXP1 JASPAR yes 2672089
chr3 58053303 58053323 RREB1 JASPAR yes 2672090
chr3 58053304 58053316 FOXC2 JASPAR yes 2672091
chr3 58053306 58053317 FOXA1 JASPAR yes 2672092
chr3 58053307 58053322 FOXP1 JASPAR yes 2672093
chr3 58053308 58053319 FOXP2 JASPAR yes 2672094
chr3 58053308 58053328 RREB1 JASPAR yes 2672095
chr3 58053308 58053329 IRF1 JASPAR yes 2672096
Genes associated with rs3732643[chr3:58053308], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More