EnhancerDB
  1. Home
  2. SNP
  3. rs373330944[chr1:41875869]
Enhancers that have rs373330944[chr1:41875869]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 41849805 41888800 enh11788
Brain (SK-N-MC) Astrocyte Colon (HCT116) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs373330944[chr1:41875869]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 41875862 41875872 ALX3 JASPAR yes 28386739
chr1 41875862 41875872 GSX1 JASPAR yes 28386740
chr1 41875862 41875872 GSX2 JASPAR yes 28386741
chr1 41875862 41875872 LHX6 JASPAR yes 28386742
chr1 41875862 41875872 MIXL1 JASPAR yes 28386743
chr1 41875862 41875872 MNX1 JASPAR yes 28386744
chr1 41875862 41875872 NOTO JASPAR yes 28386745
chr1 41875862 41875872 POU6F1 JASPAR yes 28386746
chr1 41875862 41875872 RAX JASPAR yes 28386747
chr1 41875863 41875871 ISX JASPAR yes 28386748
chr1 41875863 41875871 LMX1A JASPAR yes 28386749
chr1 41875863 41875871 LMX1B JASPAR yes 28386750
chr1 41875863 41875871 NKX6-1 JASPAR yes 28386751
chr1 41875863 41875871 NKX6-2 JASPAR yes 28386752
chr1 41875863 41875871 PRRX1 JASPAR yes 28386753
chr1 41875863 41875871 RAX2 JASPAR yes 28386754
chr1 41875863 41875871 SHOX JASPAR yes 28386755
chr1 41875863 41875871 UNCX JASPAR yes 28386756
chr1 41875863 41875871 VAX1 JASPAR yes 28386757
Genes associated with rs373330944[chr1:41875869], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More