EnhancerDB
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  3. rs373789335[chr16:4340059]
Enhancers that have rs373789335[chr16:4340059]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 4330820 4352135 enh16514
Astrocyte Colon (HCT116) Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs373789335[chr16:4340059]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 4335970 4340905 TCF7L2 GTRD no Colon (HCT116) 21686304
chr16 4339547 4340798 ZNF143 GTRD no Epithelial (MCF-7) 21686374
chr16 4339548 4340449 ZNF143 GTRD no Epithelial (MCF-7) 21686375
chr16 4339550 4340186 TCF7L2 GTRD no Colon (HCT116) 21686376
chr16 4339565 4340260 ZNF143 GTRD no Epithelial (MCF-7) 21686377
chr16 4339572 4340204 TCF7L2 GTRD no Colon (HCT116) 21686378
chr16 4339573 4340621 ZNF143 GTRD no Epithelial (MCF-7) 21686379
chr16 4339674 4340351 TCF7L2 GTRD no Colon (HCT116) 21686380
chr16 4339784 4340463 ZNF143 GTRD no Epithelial (MCF-7) 21686381
chr16 4339873 4340298 ZBTB33 GTRD no Brain (SK-N-SH) 21686382
chr16 4339931 4340829 TCF7L2 GTRD no Colon (HCT116) 21686383
chr16 4339982 4341093 ZNF143 GTRD no Epithelial (MCF-7) 21686384
chr16 4340058 4340067 SNAI2 JASPAR yes 9267147
chr16 4340058 4340068 ID4 JASPAR yes 9267148
Genes associated with rs373789335[chr16:4340059], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More