EnhancerDB
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  3. rs374050646[chr17:851962]
Enhancers that have rs374050646[chr17:851962]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 845785 881195 enh32038
Astrocyte Colon (HCT116) Pancreas Uterus Stomach Epithelial (MCF-7) Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Lung (A549) Thyroid Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Lung (PC-9) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673)
Transcript factors that have rs374050646[chr17:851962]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 851535 852131 TCF7L2 ENCODE Uniform TFBS no Pancreas (Panc1) 108227845
chr17 851733 852109 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108227846
chr17 851828 852132 ZNF274 GTRD no Bone Marrow (K562) 108227847
chr17 851863 853541 TCF7L2 GTRD no Colon (HCT116) 21739050
chr17 851863 853541 TCF7L2 GTRD no Colon (HCT116) 108227848
chr17 851952 851969 PAX1 JASPAR yes 52643813
chr17 851952 851969 PAX9 JASPAR yes 52643814
chr17 851953 851972 PAX5 JASPAR yes 52643815
chr17 851955 851962 SP1 TRANSFAC yes 52643816
chr17 851956 851962 SP1 TRANSFAC yes 52643818
Genes associated with rs374050646[chr17:851962], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More