EnhancerDB
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  3. rs374280050[chr2:240168138]
Enhancers that have rs374280050[chr2:240168138]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 240159334 240219661 enh6224
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs374280050[chr2:240168138]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 240168127 240168138 NFKB1 JASPAR yes 82220605
chr2 240168129 240168144 TFAP2A JASPAR yes 82220606
chr2 240168132 240168144 TFAP2A JASPAR yes 82220607
chr2 240168132 240168144 TFAP2B JASPAR yes 82220608
chr2 240168132 240168144 TFAP2C JASPAR yes 82220609
chr2 240168132 240168147 TFAP2A JASPAR yes 82220610
chr2 240168133 240168142 TFAP2A JASPAR yes 82220611
chr2 240168134 240168143 TFAP2A JASPAR yes 82220612
chr2 240168138 240168152 PLAG1 JASPAR yes 82220613
Genes associated with rs374280050[chr2:240168138], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More