EnhancerDB
  1. Home
  2. SNP
  3. rs374386772[chr16:24998543]
Enhancers that have rs374386772[chr16:24998543]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 24992965 25014102 enh3954
Bone Marrow (K562) Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs374386772[chr16:24998543]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 24998529 24998543 TLX1 JASPAR yes 10092374
chr16 24998539 24998543 H1TF2 TRANSFAC yes 10092375
chr16 24998539 24998543 NFE TRANSFAC yes 10092376
chr16 24998539 24998543 SRF TRANSFAC yes 10092377
chr16 24998539 24998549 HOXA13 JASPAR yes 10092378
chr16 24998539 24998549 HOXB13 JASPAR yes 10092379
chr16 24998539 24998549 HOXD13 JASPAR yes 10092380
Genes associated with rs374386772[chr16:24998543], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More