EnhancerDB
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  3. rs374397279[chr12:116974567]
Enhancers that have rs374397279[chr12:116974567]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 116953469 116985255 enh30011
Brain (SK-N-MC) Astrocyte Colon (HCT116) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Esophagus Blood (GM12878) Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs374397279[chr12:116974567]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 116974346 116976094 AR GTRD no Prostate (PC-3) 21577296
chr12 116974346 116976094 AR GTRD no Prostate (PC-3) 108061742
chr12 116974558 116974570 FOXI1 JASPAR yes 124008437
chr12 116974558 116974572 POU4F1 JASPAR yes 124008438
chr12 116974558 116974573 FOXP1 JASPAR yes 124008439
chr12 116974558 116974573 HNF1A JASPAR yes 124008440
chr12 116974559 116974571 FOXC2 JASPAR yes 124008441
chr12 116974559 116974573 ONECUT2 JASPAR yes 124008442
chr12 116974559 116974573 ONECUT3 JASPAR yes 124008443
chr12 116974560 116974571 FOXB1 JASPAR yes 124008444
chr12 116974560 116974571 FOXC1 JASPAR yes 124008445
chr12 116974560 116974571 PROP1 JASPAR yes 124008446
chr12 116974561 116974576 FOXA1 JASPAR yes 124008448
chr12 116974562 116974574 FOXI1 JASPAR yes 124008449
chr12 116974562 116974577 FOXP1 JASPAR yes 124008450
chr12 116974563 116974575 FOXC2 JASPAR yes 124008451
chr12 116974563 116974577 ONECUT2 JASPAR yes 124008452
chr12 116974563 116974577 ONECUT3 JASPAR yes 124008453
chr12 116974564 116974575 FOXB1 JASPAR yes 124008454
chr12 116974564 116974575 FOXC1 JASPAR yes 124008455
chr12 116974565 116974569 YY1 TRANSFAC yes 124008456
chr12 116974566 116974581 FOXP1 JASPAR yes 124008457
chr12 116974567 116974579 FOXC2 JASPAR yes 124008458
Genes associated with rs374397279[chr12:116974567], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More