EnhancerDB
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  3. rs374456521[chr15:42234978]
Enhancers that have rs374456521[chr15:42234978]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr15 42202285 42235244 enh3549
Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs374456521[chr15:42234978]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr15 42234966 42234981 TFAP2A JASPAR yes 23008314
chr15 42234968 42234983 TFAP2A JASPAR yes 23008315
chr15 42234969 42234981 TFAP2A JASPAR yes 23008316
chr15 42234970 42234979 TFAP2A JASPAR yes 23008317
Genes associated with rs374456521[chr15:42234978], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More