EnhancerDB
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  3. rs374675393[chr1:19725860]
Enhancers that have rs374675393[chr1:19725860]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 19711685 19745775 enh98
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Thyroid Neural Stem Cells (H9) Thymus Esophagus Blood (GM12878) Placenta Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs374675393[chr1:19725860]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 19725853 19725864 USF1 JASPAR yes 27185464
chr1 19725854 19725864 BHLHE41 JASPAR yes 27185465
chr1 19725854 19725864 SREBF2 JASPAR yes 27185466
chr1 19725854 19725864 TFE3 JASPAR yes 27185467
chr1 19725854 19725864 TFEB JASPAR yes 27185468
chr1 19725854 19725864 TFEC JASPAR yes 27185469
chr1 19725854 19725865 USF1 JASPAR yes 27185470
chr1 19725854 19725865 USF2 JASPAR yes 27185471
chr1 19725859 19725873 RORA JASPAR yes 27185472
Genes associated with rs374675393[chr1:19725860], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More