EnhancerDB
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  3. rs374993850[chr17:42180035]
Enhancers that have rs374993850[chr17:42180035]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 42170662 42193575 enh17179
Bone Marrow (K562) Astrocyte Colon (HCT116) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs374993850[chr17:42180035]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 42180025 42180046 IRF1 JASPAR yes 54387427
chr17 42180027 42180048 IRF1 JASPAR yes 54387428
chr17 42180029 42180050 IRF1 JASPAR yes 54387429
chr17 42180030 42180045 FOXP1 JASPAR yes 54387430
chr17 42180030 42180051 IRF1 JASPAR yes 54387431
chr17 42180031 42180046 STAT2 JASPAR yes 54387432
chr17 42180032 42180047 FOXP1 JASPAR yes 54387433
chr17 42180034 42180049 FOXP1 JASPAR yes 54387434
chr17 42180035 42180050 FOXP1 JASPAR yes 54387435
Genes associated with rs374993850[chr17:42180035], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More