EnhancerDB
  1. Home
  2. SNP
  3. rs3754724[chr2:238612407]
Enhancers that have rs3754724[chr2:238612407]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 238592145 238619475 enh19401
Astrocyte Pancreas Uterus Blood (T-cell) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs3754724[chr2:238612407]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 238612400 238612415 RUNX2 JASPAR yes 82134739
chr2 238612401 238612411 RUNX3 JASPAR yes 82134740
chr2 238612401 238612412 RUNX1 JASPAR yes 82134741
chr2 238612407 238612411 YY1 TRANSFAC yes 82134742
Genes associated with rs3754724[chr2:238612407], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More