EnhancerDB
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  3. rs3754725[chr2:238612386]
Enhancers that have rs3754725[chr2:238612386]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 238592145 238619475 enh19401
Astrocyte Pancreas Uterus Blood (T-cell) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs3754725[chr2:238612386]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 238612373 238612392 RFX2 JASPAR yes 82134729
chr2 238612377 238612393 RFX2 JASPAR yes 82134730
chr2 238612377 238612393 RFX3 JASPAR yes 82134731
chr2 238612377 238612393 RFX4 JASPAR yes 82134732
chr2 238612377 238612393 RFX5 JASPAR yes 82134733
chr2 238612378 238612397 RFX2 JASPAR yes 82134734
chr2 238612379 238612393 EBF1 JASPAR yes 82134735
chr2 238612381 238612392 EBF1 JASPAR yes 82134736
Genes associated with rs3754725[chr2:238612386], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More