EnhancerDB
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  3. rs375563614[chr2:240177141]
Enhancers that have rs375563614[chr2:240177141]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 240159334 240219661 enh6224
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs375563614[chr2:240177141]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 240177135 240177152 RXRA JASPAR yes 82221841
chr2 240177140 240177150 HOXC10 JASPAR yes 82221842
chr2 240177140 240177151 HOXA10 JASPAR yes 82221843
chr2 240177140 240177151 HOXC11 JASPAR yes 82221844
chr2 240177140 240177151 HOXC12 JASPAR yes 82221845
chr2 240177140 240177151 HOXD12 JASPAR yes 82221846
chr2 240177141 240177150 CDX1 JASPAR yes 82221847
chr2 240177141 240177152 CDX2 JASPAR yes 82221848
Genes associated with rs375563614[chr2:240177141], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More