EnhancerDB
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  3. rs375836389[chr2:240197753]
Enhancers that have rs375836389[chr2:240197753]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 240159334 240219661 enh6224
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs375836389[chr2:240197753]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 240197744 240197754 NFKB1 JASPAR yes 82224804
chr2 240197746 240197761 TFAP2A JASPAR yes 82224805
chr2 240197747 240197762 TFAP2A JASPAR yes 82224806
chr2 240197749 240197761 TFAP2A JASPAR yes 82224807
chr2 240197749 240197761 TFAP2B JASPAR yes 82224808
chr2 240197749 240197761 TFAP2C JASPAR yes 82224809
chr2 240197749 240197764 TFAP2A JASPAR yes 82224810
chr2 240197749 240197764 TFAP2C JASPAR yes 82224811
chr2 240197750 240197759 TFAP2A JASPAR yes 82224812
chr2 240197750 240197761 EBF1 JASPAR yes 82224813
chr2 240197751 240197760 TFAP2A JASPAR yes 82224814
chr2 240197752 240197767 RFX5 JASPAR yes 82224815
Genes associated with rs375836389[chr2:240197753], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More