EnhancerDB
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  3. rs375856262[chr15:42224233]
Enhancers that have rs375856262[chr15:42224233]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr15 42202285 42235244 enh3549
Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs375856262[chr15:42224233]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr15 42224232 42224248 RFX2 JASPAR yes 23006866
chr15 42224232 42224248 RFX3 JASPAR yes 23006867
chr15 42224232 42224248 RFX4 JASPAR yes 23006868
chr15 42224232 42224248 RFX5 JASPAR yes 23006869
Genes associated with rs375856262[chr15:42224233], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More