EnhancerDB
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  3. rs375982938[chr17:55998275]
Enhancers that have rs375982938[chr17:55998275]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 55982093 56031480 enh4496
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs375982938[chr17:55998275]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 55998268 55998281 ZBTB18 JASPAR yes 54999526
chr17 55998269 55998281 PKNOX1 JASPAR yes 54999527
chr17 55998269 55998281 TGIF1 JASPAR yes 54999528
chr17 55998270 55998279 SNAI2 JASPAR yes 54999529
chr17 55998270 55998280 FIGLA JASPAR yes 54999530
chr17 55998270 55998280 ID4 JASPAR yes 54999531
chr17 55998270 55998280 TCF3 JASPAR yes 54999532
chr17 55998270 55998280 TCF4 JASPAR yes 54999533
chr17 55998272 55998281 ZEB1 JASPAR yes 54999534
chr17 55998272 55998282 TBX21 JASPAR yes 54999535
chr17 55998273 55998281 MGA JASPAR yes 54999536
chr17 55998273 55998281 TBX15 JASPAR yes 54999537
chr17 55998273 55998281 TBX1 JASPAR yes 54999538
chr17 55998273 55998281 TBX4 JASPAR yes 54999539
chr17 55998273 55998281 TBX5 JASPAR yes 54999540
chr17 55998273 55998283 TBR1 JASPAR yes 54999541
chr17 55998273 55998286 SMAD2 JASPAR yes 54999542
Genes associated with rs375982938[chr17:55998275], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More