EnhancerDB
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  3. rs376001960[chr2:102383587]
Enhancers that have rs376001960[chr2:102383587]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 102318065 102395755 enh5746
Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Spleen Muscle (Myotube) Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
chr2 102383406 102383725 vista32521
VISTA
Transcript factors that have rs376001960[chr2:102383587]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 102383573 102383591 NFYA JASPAR yes 22102495
chr2 102383573 102383591 NFYA JASPAR yes 75837489
chr2 102383576 102383592 NFYA JASPAR yes 22102496
chr2 102383576 102383592 NFYA JASPAR yes 75837490
chr2 102383578 102383588 ALX3 JASPAR yes 22102497
chr2 102383578 102383588 ESX1 JASPAR yes 22102498
chr2 102383578 102383588 GBX1 JASPAR yes 22102499
chr2 102383578 102383588 GBX2 JASPAR yes 22102500
chr2 102383578 102383588 GSX1 JASPAR yes 22102501
chr2 102383578 102383588 GSX2 JASPAR yes 22102502
chr2 102383578 102383588 HESX1 JASPAR yes 22102503
chr2 102383578 102383588 HOXB3 JASPAR yes 22102504
chr2 102383578 102383588 LBX2 JASPAR yes 22102505
chr2 102383578 102383588 LHX2 JASPAR yes 22102506
chr2 102383578 102383588 MIXL1 JASPAR yes 22102507
chr2 102383578 102383588 RAX JASPAR yes 22102508
chr2 102383578 102383588 ALX3 JASPAR yes 75837491
chr2 102383578 102383588 ESX1 JASPAR yes 75837492
chr2 102383578 102383588 GBX1 JASPAR yes 75837493
chr2 102383578 102383588 GBX2 JASPAR yes 75837494
chr2 102383578 102383588 GSX1 JASPAR yes 75837495
chr2 102383578 102383588 GSX2 JASPAR yes 75837496
chr2 102383578 102383588 HESX1 JASPAR yes 75837497
chr2 102383578 102383588 HOXB3 JASPAR yes 75837498
chr2 102383578 102383588 LBX2 JASPAR yes 75837499
chr2 102383578 102383588 LHX2 JASPAR yes 75837500
chr2 102383578 102383588 MIXL1 JASPAR yes 75837501
chr2 102383578 102383588 RAX JASPAR yes 75837502
chr2 102383579 102383587 BARX1 JASPAR yes 22102509
chr2 102383579 102383587 BSX JASPAR yes 22102510
chr2 102383579 102383587 EN1 JASPAR yes 22102511
chr2 102383579 102383587 ISX JASPAR yes 22102512
chr2 102383579 102383587 LHX9 JASPAR yes 22102513
chr2 102383579 102383587 MSX1 JASPAR yes 22102514
chr2 102383579 102383587 MSX2 JASPAR yes 22102515
chr2 102383579 102383587 PRRX1 JASPAR yes 22102516
chr2 102383579 102383587 RAX2 JASPAR yes 22102517
chr2 102383579 102383587 SHOX JASPAR yes 22102518
chr2 102383579 102383587 BARX1 JASPAR yes 75837503
chr2 102383579 102383587 BSX JASPAR yes 75837504
chr2 102383579 102383587 EN1 JASPAR yes 75837505
chr2 102383579 102383587 ISX JASPAR yes 75837506
chr2 102383579 102383587 LHX9 JASPAR yes 75837507
chr2 102383579 102383587 MSX1 JASPAR yes 75837508
chr2 102383579 102383587 MSX2 JASPAR yes 75837509
chr2 102383579 102383587 PRRX1 JASPAR yes 75837510
chr2 102383579 102383587 RAX2 JASPAR yes 75837511
chr2 102383579 102383587 SHOX JASPAR yes 75837512
chr2 102383579 102383588 VENTX JASPAR yes 22102519
chr2 102383579 102383588 VENTX JASPAR yes 75837513
Genes associated with rs376001960[chr2:102383587], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More