EnhancerDB
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  3. rs3760166[chr17:56029239]
Enhancers that have rs3760166[chr17:56029239]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 55982093 56031480 enh4496
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs3760166[chr17:56029239]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 56029229 56029245 POU4F2 JASPAR yes 55004112
chr17 56029229 56029245 POU4F3 JASPAR yes 55004113
chr17 56029231 56029245 POU4F1 JASPAR yes 55004115
chr17 56029236 56029246 BARHL2 JASPAR yes 55004116
chr17 56029238 56029242 YY1 TRANSFAC yes 55004117
chr17 56029238 56029248 HOXC10 JASPAR yes 55004118
chr17 56029238 56029249 HOXC11 JASPAR yes 55004119
chr17 56029238 56029249 HOXD12 JASPAR yes 55004120
chr17 56029239 56029248 CDX1 JASPAR yes 55004121
chr17 56029239 56029250 CDX2 JASPAR yes 55004122
Genes associated with rs3760166[chr17:56029239], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More