EnhancerDB
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  3. rs376079933[chr1:39612122]
Enhancers that have rs376079933[chr1:39612122]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 39588469 39628695 enh11759
Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Adrenal Pancreas Uterus Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs376079933[chr1:39612122]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 39612119 39612134 FOXP1 JASPAR yes 28257955
chr1 39612120 39612135 FOXP1 JASPAR yes 28257956
chr1 39612120 39612141 IRF1 JASPAR yes 28257957
chr1 39612121 39612136 FOXP1 JASPAR yes 28257958
chr1 39612121 39612142 IRF1 JASPAR yes 28257959
chr1 39612122 39612137 FOXP1 JASPAR yes 28257960
Genes associated with rs376079933[chr1:39612122], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More