EnhancerDB
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  3. rs376135340[chr1:234885827]
Enhancers that have rs376135340[chr1:234885827]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 234877045 234913055 enh12796
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs376135340[chr1:234885827]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 234885634 234886066 ZNF274 GTRD no Liver (HepG2) 21397525
chr1 234885791 234886509 TCF7L2 GTRD no Colon (HCT116) 21397526
chr1 234885820 234885830 NFKB1 JASPAR yes 36311039
Genes associated with rs376135340[chr1:234885827], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More