EnhancerDB
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  3. rs376486390[chr16:29171065]
Enhancers that have rs376486390[chr16:29171065]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 29150646 29173335 enh16623
Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Brain (SK-N-SH) Prostate (RWPE1) Ovary Esophagus Astrocyte Blood (T-cell) Lung (A549) Stomach Placenta Uterus Lung (PC-9) Breast Muscle (Myotube) Neural Stem Cells (H9) Thymus Heart
chr16 29170991 29171253 vista22322
VISTA
Transcript factors that have rs376486390[chr16:29171065]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 29170406 29171716 ZBTB33 GTRD no Brain (SK-N-SH) 21701847
chr16 29170406 29171716 ZBTB33 GTRD no Brain (SK-N-SH) 108191381
chr16 29171050 29171616 ZNF274 GTRD no Blood (GM12878) 108191382
chr16 29171056 29171069 SMAD2 JASPAR yes 10246745
chr16 29171056 29171069 SMAD2 JASPAR yes 49363522
chr16 29171059 29171067 MEIS2 JASPAR yes 10246746
chr16 29171059 29171067 MEIS3 JASPAR yes 10246747
chr16 29171059 29171067 MEIS2 JASPAR yes 49363523
chr16 29171059 29171067 MEIS3 JASPAR yes 49363524
chr16 29171060 29171074 ATF7 JASPAR yes 10246749
chr16 29171060 29171074 BATF3 JASPAR yes 10246750
chr16 29171060 29171074 CREB3 JASPAR yes 10246751
chr16 29171060 29171074 CREB3L1 JASPAR yes 10246752
chr16 29171060 29171074 ATF7 JASPAR yes 49363526
chr16 29171060 29171074 BATF3 JASPAR yes 49363527
chr16 29171060 29171074 CREB3 JASPAR yes 49363528
chr16 29171060 29171074 CREB3L1 JASPAR yes 49363529
chr16 29171062 29171072 SREBF1 JASPAR yes 10246753
chr16 29171062 29171072 SREBF2 JASPAR yes 10246754
chr16 29171062 29171072 SREBF1 JASPAR yes 49363530
chr16 29171062 29171072 SREBF2 JASPAR yes 49363531
chr16 29171065 29171070 ATF1 TRANSFAC yes 10246755
chr16 29171065 29171070 ATF1 TRANSFAC yes 49363532
Genes associated with rs376486390[chr16:29171065], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More